This email address is being protected from spambots. Genomics, Annotation, RNA-Seq, Short-read mapping organization of databases through Word and Excel, plus the use of bioinformatic sequencing softwares such as CLC Sequence Viewer 8, Chromas and BLAST. The course is aimed at PhD students, postdoctoral fellows or other scientists with a solid background in bioinformatics and molecular biology. QIAGEN CLC Main Workbench is used by tens of thousands of researchers in academia as well as in industry for DNA, RNA and protein sequence data analysis. Participants will be instructed in the genomics workflow and gain understanding of the possibilities and limitations of genome sequencing and sequence analysis. The course is split into two parts:ġ.) Basic training on Genomics Workbench: Data preparation, QC evaluation, read mapping, variant detection, de novo sequencing, genome finishing, de novo assemblyĢ.) Advanced training on Genomics Workbench: Set-up automatic pipeline, RNA-Seq analysis, Chip-Seq and methylation analysis, OTU Clustering and Analysis of Microbial Communities Professional trainers from CLC bio will present the Genomics Workbench with a focus on de-novo genome assembly, short-read mapping, and RNA-Seq experiment. The CLC Genomics Workbench is a commercial software for the analysis and visualization of next generation sequencing data. The NCBI Sequence Viewer (the web interface of the NCBI Genome Workbench) is the graphical display for the Nucleotide and Protein databases. we used the clc command to clear the command window of Matlab. This course will teach participants how to use the CLC Genomics Workbench for genome analysis. Download scientific diagram Multiple sequence alignment, conducted by CLC Sequence viewer 8.0, of partial nucleotide sequences for vagA from five strains. It is used for representing the input data into a sequence format. For example, for the Genomics Workbench version 23.0.1. Alexander Goesmann, Jochen Blom, Oliver Rupp, Lukas Jelonek, Rolf Hilker (BiGi) CLC Sequence Viewer 8.0 Build 168747 17,430 downloads Updated: JFreeware 3. To cite a QIAGEN CLC Workbench or Server product at a general level, please cite our website.
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